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  5. Tin_g09510

Tin_g09510 (LD)


Aliases : LD

Description : flowering time factor *(LD) & original description: none


Gene families : OG0006989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006989_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g09510

Target Alias Description ECC score Gene Family Method Actions
AT4G02560 LD Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g25551 LD flowering time factor *(LD) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.26G026900.1 LD, Ceric.26G026900 flowering time factor *(LD) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g17093 LD flowering time factor *(LD) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13836 LD flowering time factor *(LD) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g70810.1 LD, LOC_Os01g70810 transcription factor (LD) 0.02 OrthoFinder output from all 47 species
Len_g02925 LD flowering time factor *(LD) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02445 LD flowering time factor *(LD) & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g13160.1 LD transcription factor (LD). C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Nbi_g27547 LD flowering time factor *(LD) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g29881 LD flowering time factor *(LD) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g074690.3.1 LD, Solyc09g074690 transcription factor (LD) 0.03 OrthoFinder output from all 47 species
Spa_g50354 LD flowering time factor *(LD) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
BP GO:0032469 endoplasmic reticulum calcium ion homeostasis IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!