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  5. Tin_g09496

Tin_g09496


Description : not classified & original description: none


Gene families : OG0004428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004428_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g09496
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT2G34357 No alias ARM repeat superfamily protein 0.04 OrthoFinder output from all 47 species
Ceric.18G047800.1 Ceric.18G047800 not classified & original description: pacid=50622555... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.42 No alias No description available 0.03 OrthoFinder output from all 47 species
Ehy_g05092 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g54110.1 LOC_Os02g54110 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g07438 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433024g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_242029g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_55053g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g16189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36824 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo78845 No alias No description available 0.02 OrthoFinder output from all 47 species
Spa_g29647 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e016059_P003 Zm00001e016059 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016151 nickel cation binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
InterPro domains Description Start Stop
IPR012978 RRP12-like_dom 405 606
No external refs found!