Aliases : VIM1, ORTH2
Description : regulatory E3 ubiquiTin ligase (ORTH/VIM) of RNA-independent DNA methylation & original description: none
Gene families : OG0003058 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003058_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Tin_g09471 | |
Cluster | HCCA: Cluster_76 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ceric.01G130300.1 | VIM1, ORTH2,... | regulatory E3 ubiquitin ligase (ORTH/VIM) of... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.02G085800.1 | VIM1, ORTH2,... | regulatory E3 ubiquitin ligase (ORTH/VIM) of... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001024.15 | VIM1, ORTH2 | E3 ubiquitin-protein ligase ORTHRUS 2 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Cre03.g163850 | VIM1, ORTH2 | E3 ubiquitin-protein ligase ORTHRUS 2 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
Gb_19211 | VIM1, ORTH2 | E3 ubiquitin-protein ligase ORTHRUS 2 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Mp1g04780.1 | VIM1, ORTH2 | E3 ubiquitin-protein ligase ORTHRUS 2 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e029714_P002 | VIM1, ORTH2,... | E3 ubiquitin-protein ligase ORTHRUS 2 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0015631 | tubulin binding | IEP | HCCA |
MF | GO:0016409 | palmitoyltransferase activity | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0043015 | gamma-tubulin binding | IEP | HCCA |
No external refs found! |