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  5. Tin_g09448

Tin_g09448


Description : stability factor *(PPR10) & original description: none


Gene families : OG0006045 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006045_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g09448

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00034670 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g02860... 0.04 OrthoFinder output from all 47 species
Ala_g06016 No alias stability factor *(PPR10) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02296 No alias stability factor *(PPR10) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01037880001 No alias Pentatricopeptide repeat-containing protein At5g02860... 0.05 OrthoFinder output from all 47 species
LOC_Os07g40120.1 LOC_Os07g40120 plastidial mRNA processing factor (PPR10) 0.04 OrthoFinder output from all 47 species
Lfl_g02252 No alias stability factor *(PPR10) & original description: none 0.03 OrthoFinder output from all 47 species
MA_8893308g0010 No alias plastidial mRNA processing factor (PPR10) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004797 thymidine kinase activity IEP HCCA
MF GO:0019136 deoxynucleoside kinase activity IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0019206 nucleoside kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 323 355
IPR002885 Pentatricopeptide_repeat 261 321
IPR002885 Pentatricopeptide_repeat 189 250
IPR002885 Pentatricopeptide_repeat 365 426
IPR002885 Pentatricopeptide_repeat 626 655
IPR002885 Pentatricopeptide_repeat 660 690
IPR002885 Pentatricopeptide_repeat 759 789
IPR002885 Pentatricopeptide_repeat 692 739
IPR002885 Pentatricopeptide_repeat 447 494
IPR002885 Pentatricopeptide_repeat 517 565
No external refs found!