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  5. Tin_g09297

Tin_g09297 (GAMMA-H2AX, HTA5,...)


Aliases : GAMMA-H2AX, HTA5, G-H2AX, H2AXA

Description : histone *(H2A) & original description: none


Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g09297
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
Adi_g005118 GAMMA-H2AX,... histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g050953 HTA7 histone *(H2A) & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g052170 HTA10 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G035500.1 GAMMA-H2AX,... histone *(H2A) & original description: pacid=50600851... 0.04 OrthoFinder output from all 47 species
Msp_g06768 GAMMA-H2AX,... histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19378 HTA10 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 58 136
IPR032454 Histone_H2A_C 139 172
No external refs found!