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  5. Tin_g09138

Tin_g09138


Description : not classified & original description: none


Gene families : OG0007858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007858_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g09138

Target Alias Description ECC score Gene Family Method Actions
AT5G20220 No alias zinc knuckle (CCHC-type) family protein 0.03 OrthoFinder output from all 47 species
Als_g11580 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69444 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.06G003700.1 Ceric.06G003700 not classified & original description: pacid=50620472... 0.04 OrthoFinder output from all 47 species
GSVIVT01020063001 No alias No description available 0.03 OrthoFinder output from all 47 species
Nbi_g17916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09649 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11210 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g05739 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g27877 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g40574 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc05g007090.4.1 Solyc05g007090 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004371 glycerone kinase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006071 glycerol metabolic process IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006480 N-terminal protein amino acid methylation IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019400 alditol metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!