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  5. Tin_g09110

Tin_g09110 (GH3.5, WES1)


Aliases : GH3.5, WES1

Description : not classified & original description: none


Gene families : OG0000376 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000376_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g09110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00199760 GH3.9,... Putative indole-3-acetic acid-amido synthetase GH3.9... 0.02 OrthoFinder output from all 47 species
AT2G23170 GH3.3 Auxin-responsive GH3 family protein 0.02 OrthoFinder output from all 47 species
AT4G27260 GH3.5, WES1 Auxin-responsive GH3 family protein 0.04 OrthoFinder output from all 47 species
AT5G51470 No alias Auxin-responsive GH3 family protein 0.02 OrthoFinder output from all 47 species
Ala_g18733 YDK1, AUR3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24399 GH3.5, WES1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03301.t1 GH3.5, WES1,... indole-3-acetic acid-amido synthetase *(GH3) & original... 0.04 OrthoFinder output from all 47 species
Ceric.06G002400.1 DFL1, GH3.6,... not classified & original description: pacid=50620356... 0.03 OrthoFinder output from all 47 species
Ceric.26G006600.1 GH3.5, WES1,... not classified & original description: pacid=50599333... 0.04 OrthoFinder output from all 47 species
Dac_g32799 GH3.5, WES1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g44438 GH3.1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12600 DFL1, GH3.6 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g25677 GH3.5, WES1 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.05 OrthoFinder output from all 47 species
Gb_00287 DFL1, GH3.6 Indole-3-acetic acid-amido synthetase GH3.6... 0.03 OrthoFinder output from all 47 species
Gb_04369 No alias indole-3-acetic acid-amido synthetase 0.03 OrthoFinder output from all 47 species
Gb_06148 GH3.17 Indole-3-acetic acid-amido synthetase GH3.17... 0.05 OrthoFinder output from all 47 species
Gb_38023 GH3.5, WES1 Indole-3-acetic acid-amido synthetase GH3.5... 0.03 OrthoFinder output from all 47 species
LOC_Os11g32510.1 GH3.17, LOC_Os11g32510 Indole-3-acetic acid-amido synthetase GH3.17... 0.04 OrthoFinder output from all 47 species
LOC_Os11g32520.1 GH3.17, LOC_Os11g32520 Probable indole-3-acetic acid-amido synthetase GH3.13... 0.03 OrthoFinder output from all 47 species
MA_10434772g0010 DFL1, GH3.6 indole-3-acetic acid-amido synthetase 0.02 OrthoFinder output from all 47 species
Msp_g37634 DFL1, GH3.6 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.04 OrthoFinder output from all 47 species
Msp_g43816 DFL1, GH3.6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31410 GH3.5, WES1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g107390.4.1 GH3.1, Solyc01g107390 indole-3-acetic acid-amido synthetase 0.03 OrthoFinder output from all 47 species
Solyc02g064810.1.1 GH3.1, Solyc02g064810 Probable indole-3-acetic acid-amido synthetase GH3.1... 0.03 OrthoFinder output from all 47 species
Solyc02g064830.4.1 GH3.1, Solyc02g064830 indole-3-acetic acid-amido synthetase 0.03 OrthoFinder output from all 47 species
Spa_g06910 GH3.5, WES1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011159_P002 GH3.17, Zm00001e011159 Indole-3-acetic acid-amido synthetase GH3.17... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004993 GH3 66 614
No external refs found!