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  5. Tin_g09034

Tin_g09034


Description : not classified & original description: none


Gene families : OG0004940 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004940_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g09034

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00610p00011750 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Als_g03574 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.03G023500.1 Ceric.03G023500 not classified & original description: pacid=50571996... 0.04 OrthoFinder output from all 47 species
LOC_Os04g02000.1 LOC_Os04g02000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g00433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001876 Znf_RanBP2 145 170
IPR001876 Znf_RanBP2 288 316
IPR001876 Znf_RanBP2 9 36
IPR001876 Znf_RanBP2 52 80
No external refs found!