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  5. Tin_g08990

Tin_g08990 (HCC1)


Aliases : HCC1

Description : metallochaperone HCC of cytochrome c oxidase assembly & original description: none


Gene families : OG0002324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002324_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g08990
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Adi_g012217 HCC1 metallochaperone HCC of cytochrome c oxidase assembly &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s1400.g028029 HCC1 metallochaperone HCC of cytochrome c oxidase assembly &... 0.02 OrthoFinder output from all 47 species
Sam_g09554 No alias metallochaperone HCC of cytochrome c oxidase assembly &... 0.03 OrthoFinder output from all 47 species
Sam_g24683 No alias metallochaperone HCC of cytochrome c oxidase assembly &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004592 pantoate-beta-alanine ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003782 SCO1/SenC 139 274
No external refs found!