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  5. Tin_g08853

Tin_g08853


Description : defensin *(PDF1) & original description: none


Gene families : OG0008422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008422_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g08853
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
Ala_g26134 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26135 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37700 No alias defensin *(PDF1) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09971.t1 Aspi01Gene09971 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58132.t1 Aspi01Gene58132 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g10782 No alias defensin *(PDF1) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03571 No alias defensin *(PDF1) & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g05188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53796 No alias defensin *(PDF1) & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g56938 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!