Tin_g08736


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g08736

Target Alias Description ECC score Gene Family Method Actions
Adi_g007230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g010386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014847 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g022715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g054668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088267 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21594 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g30236 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05733 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07070 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07137 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07408 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07428 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26435 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26697 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30421 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30875 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30893 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54731 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03222 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04899 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g07597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08735 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g09161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29464 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0090.g042638 No alias not classified & original description: CDS=1-2115 0.03 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.03 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.03 OrthoFinder output from all 47 species
Azfi_s0254.g060453 No alias not classified & original description: CDS=1-2166 0.05 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.03 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.03 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.03 OrthoFinder output from all 47 species
Cba_g05283 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g44526 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67756 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67893 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G072000.1 Ceric.02G072000 not classified & original description: pacid=50584704... 0.05 OrthoFinder output from all 47 species
Ceric.09G002900.1 Ceric.09G002900 not classified & original description: pacid=50586532... 0.03 OrthoFinder output from all 47 species
Ceric.09G005800.1 CRR22, Ceric.09G005800 not classified & original description: pacid=50588191... 0.04 OrthoFinder output from all 47 species
Ceric.11G090500.1 Ceric.11G090500 not classified & original description: pacid=50596019... 0.03 OrthoFinder output from all 47 species
Ceric.13G012100.1 VAC1, ECB2,... not classified & original description: pacid=50635600... 0.05 OrthoFinder output from all 47 species
Ceric.17G075500.1 Ceric.17G075500 not classified & original description: pacid=50617952... 0.04 OrthoFinder output from all 47 species
Ceric.18G038700.1 Ceric.18G038700 not classified & original description: pacid=50621594... 0.03 OrthoFinder output from all 47 species
Ceric.19G039900.1 Ceric.19G039900 not classified & original description: pacid=50575946... 0.04 OrthoFinder output from all 47 species
Ceric.1Z015700.1 VAC1, ECB2,... not classified & original description: pacid=50604577... 0.03 OrthoFinder output from all 47 species
Ceric.1Z025200.1 Ceric.1Z025200 not classified & original description: pacid=50576842... 0.03 OrthoFinder output from all 47 species
Ceric.20G054700.1 Ceric.20G054700 not classified & original description: pacid=50567573... 0.04 OrthoFinder output from all 47 species
Ceric.21G077300.1 Ceric.21G077300 not classified & original description: pacid=50604263... 0.03 OrthoFinder output from all 47 species
Ceric.31G051800.1 Ceric.31G051800 not classified & original description: pacid=50574746... 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.03 OrthoFinder output from all 47 species
Dac_g10603 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13392 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g14985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21332 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22785 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28876 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g30497 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g02401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04922 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23967 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26582 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g30526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31748 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g46895 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g13517 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g14206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14566 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19433 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g19629 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g23238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47068 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g05005 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05007 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13947 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32917 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g22634 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g24319 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31826 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17427 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19389 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01966 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02291 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g05641 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g07034 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18621 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18859 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g45103 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61716 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g66458 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02232 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03925 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18939 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g39388 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g43486 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17490 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27535 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g04449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06768 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g08260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15863 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g17847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17848 OTP86 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g18575 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18721 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23501 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49341 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g56098 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28391 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g34089 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0030490 maturation of SSU-rRNA IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 534 582
IPR002885 Pentatricopeptide_repeat 419 467
IPR002885 Pentatricopeptide_repeat 768 815
IPR002885 Pentatricopeptide_repeat 885 933
IPR002885 Pentatricopeptide_repeat 651 698
IPR002885 Pentatricopeptide_repeat 201 247
IPR002885 Pentatricopeptide_repeat 301 348
IPR002885 Pentatricopeptide_repeat 1024 1050
IPR002885 Pentatricopeptide_repeat 1062 1085
IPR002885 Pentatricopeptide_repeat 276 297
IPR002885 Pentatricopeptide_repeat 743 763
No external refs found!