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  5. Tin_g08253

Tin_g08253


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g08253
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT5G01660 No alias CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch,... 0.02 OrthoFinder output from all 47 species
Adi_g004478 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102650 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g110934 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115740 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g30702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24024 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g59770 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g26800 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_00306 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g32270.1 LOC_Os11g32270 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g20730 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g02891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03608 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g04165 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08837 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g094130.3.1 Solyc02g094130 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 268.0) 0.03 OrthoFinder output from all 47 species
Spa_g36300 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005956 protein kinase CK2 complex IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0061666 UFM1 ligase activity IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
CC GO:0070531 BRCA1-A complex IEP HCCA
CC GO:0070552 BRISC complex IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0071568 UFM1 transferase activity IEP HCCA
BP GO:0071569 protein ufmylation IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 33 157
No external refs found!