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  5. Tin_g08093

Tin_g08093 (AFB2)


Aliases : AFB2

Description : substrate adaptor of SCF E3 ubiquiTin ligase *(TIR1/AFB) & original description: none


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g08093
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT4G03190 AFB1, ATGRH1, GRH1 GRR1-like protein 1 0.02 OrthoFinder output from all 47 species
Als_g03800 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Azfi_s0129.g048837 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Ehy_g01586 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Ehy_g03881 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Gb_07237 COI1 Coronatine-insensitive protein homolog 1b OS=Oryza... 0.02 OrthoFinder output from all 47 species
Gb_37967 COI1 component COI of jasmonic acid receptor complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 506 525
IPR001611 Leu-rich_rpt 180 200
IPR041101 Transp_inhibit 92 138
IPR041567 COI1_F-box 34 72
No external refs found!