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  5. Tin_g07690

Tin_g07690


Description : TCX/CPP-type transcription factor & original description: none


Gene families : OG0003303 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003303_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g07690

Target Alias Description ECC score Gene Family Method Actions
AT2G20110 No alias Tesmin/TSO1-like CXC domain-containing protein 0.03 OrthoFinder output from all 47 species
Aop_g11545 No alias TCX/CPP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23075 No alias TCX/CPP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g17460.1 LOC_Os02g17460 CPP1-like transcription factor 0.02 OrthoFinder output from all 47 species
Len_g23191 No alias TCX/CPP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15135 No alias TCX/CPP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10882 No alias TCX/CPP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14904 No alias TCX/CPP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029008_P001 Zm00001e029008 CPP1-like transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005172 CRC 150 184
IPR005172 CRC 235 270
No external refs found!