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  5. Tin_g07663

Tin_g07663


Description : HYL1-interacTing scaffold factor (CARP9) of miRNA biogenesis pathway & original description: none


Gene families : OG0002982 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002982_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g07663

Target Alias Description ECC score Gene Family Method Actions
Len_g24720 No alias HYL1-interacting scaffold factor (CARP9) of miRNA... 0.04 OrthoFinder output from all 47 species
Sam_g30029 No alias HYL1-interacting scaffold factor (CARP9) of miRNA... 0.02 OrthoFinder output from all 47 species
Solyc03g121380.3.1 Solyc03g121380 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g18288 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR010844 Occludin_ELL 951 1048
No external refs found!