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  5. Tin_g07456

Tin_g07456


Description : RNA ediTing factor *(MEF14) & original description: none


Gene families : OG0003511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003511_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g07456
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Ceric.04G013600.1 Ceric.04G013600 RNA editing factor *(MEF14) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g11934 No alias RNA editing factor *(MEF14) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08319 No alias RNA editing factor *(MEF14) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01033003001 No alias RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
Gb_05421 No alias RNA editing factor (MEF14) 0.05 OrthoFinder output from all 47 species
MA_60411g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g09051 No alias RNA editing factor *(MEF14) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38796 No alias RNA editing factor *(MEF14) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g02519 No alias RNA editing factor *(MEF14) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52169 No alias RNA editing factor *(MEF14) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021512_P002 Zm00001e021512 RNA editing factor (MEF14) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013078 His_Pase_superF_clade-1 358 418
IPR013078 His_Pase_superF_clade-1 128 265
No external refs found!