- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : 4CL3
Description : EC_6.2 ligase forming carbon-sulfur bond & original description: none
Gene families : OG0000673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000673_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Tin_g07442 | |
| Cluster | HCCA: Cluster_44 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00019p00213640 | 4CL1, AT4CL1,... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00025p00217510 | ACOS5,... | 4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00025p00217630 | ACOS5,... | 4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AT1G51680 | 4CL1, AT4CL1, 4CL.1 | 4-coumarate:CoA ligase 1 | 0.05 | OrthoFinder output from all 47 species | |
| AT1G62940 | ACOS5 | acyl-CoA synthetase 5 | 0.08 | OrthoFinder output from all 47 species | |
| AT1G65060 | 4CL3 | 4-coumarate:CoA ligase 3 | 0.04 | OrthoFinder output from all 47 species | |
| AT3G21240 | AT4CL2, 4CL2 | 4-coumarate:CoA ligase 2 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g058249 | 4CL1, AT4CL1, 4CL.1 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g103472 | AT4CL2, 4CL2 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.12 | OrthoFinder output from all 47 species | |
| Aev_g02337 | 4CL1, AT4CL1, 4CL.1 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g14525 | 4CL1, AT4CL1, 4CL.1 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g06612 | 4CL1, AT4CL1, 4CL.1 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.11 | OrthoFinder output from all 47 species | |
| Aop_g17905 | 4CL1, AT4CL1, 4CL.1 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g20296 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g20826 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene11403.t1 | AT4CL2, 4CL2,... | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene16478.t1 | ACOS5, Aspi01Gene16478 | acyl-CoA synthetase *(ACS5) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene46333.t1 | 4CL3, Aspi01Gene46333 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene53552.t1 | 4CL1, AT4CL1,... | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g007625 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0013.g013344 | AT4CL2, 4CL2 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0027.g023677 | ACOS5 | not classified & original description: CDS=1-1590 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0114.g046013 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g03267 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g34238 | AT4CL2, 4CL2 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g41839 | 4CL1, AT4CL1, 4CL.1 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.12G038600.1 | 4CL3, Ceric.12G038600 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.12G077900.1 | 4CL3, Ceric.12G077900 | not classified & original description: pacid=50601305... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.15G048400.1 | 4CL3, Ceric.15G048400 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.17G083800.1 | AT4CL2, 4CL2,... | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.09 | OrthoFinder output from all 47 species | |
| Ceric.33G041000.1 | ACOS5, Ceric.33G041000 | acyl-CoA synthetase *(ACS5) & original description:... | 0.08 | OrthoFinder output from all 47 species | |
| Dac_g07445 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.13 | OrthoFinder output from all 47 species | |
| Dcu_g07017 | AT4CL2, 4CL2 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g09728 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.12 | OrthoFinder output from all 47 species | |
| Dcu_g17383 | ACOS5 | acyl-CoA synthetase *(ACS5) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Dde_g24331 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.1 | OrthoFinder output from all 47 species | |
| Dde_g31145 | ACOS5 | acyl-CoA synthetase *(ACS5) & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Dde_g31505 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01010497001 | ACOS5 | Cell wall.sporopollenin.synthesis.ACS5 acyl-CoA synthetase | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01024400001 | 4CL3 | 4-coumarate--CoA ligase 2 OS=Glycine max | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01029182001 | 4CL1, AT4CL1, 4CL.1 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01029183001 | AT4CL2, 4CL2 | 4-coumarate--CoA ligase 1 OS=Nicotiana tabacum | 0.06 | OrthoFinder output from all 47 species | |
| Gb_03647 | 4CL1, AT4CL1, 4CL.1 | 4-coumarate--CoA ligase OS=Pinus taeda... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_40573 | 4CL3 | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_41091 | 4CL3 | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g08100.1 | 4CL1, AT4CL1,... | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g46970.1 | 4CL3, LOC_Os02g46970 | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g24530.1 | ACOS5, LOC_Os04g24530 | acyl-CoA synthetase (ACS5) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os06g44620.1 | 4CL1, AT4CL1,... | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g34790.1 | AT4CL2, 4CL2,... | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g06579 | 4CL1, AT4CL1, 4CL.1 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06994 | AT4CL2, 4CL2 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g15665 | 4CL1, AT4CL1, 4CL.1 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.02 | OrthoFinder output from all 47 species | |
| MA_109119g0010 | 4CL3 | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.03 | OrthoFinder output from all 47 species | |
| MA_70509g0010 | 4CL1, AT4CL1, 4CL.1 | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.03 | OrthoFinder output from all 47 species | |
| MA_8946476g0010 | ACOS5 | acyl-CoA synthetase (ACS5) | 0.09 | OrthoFinder output from all 47 species | |
| Mp5g01200.1 | 4CL1, AT4CL1, 4CL.1 | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g00641 | 4CL1, AT4CL1, 4CL.1 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.08 | OrthoFinder output from all 47 species | |
| Msp_g40313 | ACOS5 | acyl-CoA synthetase *(ACS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g02279 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g10215 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g32420 | 4CL1, AT4CL1, 4CL.1 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.09 | OrthoFinder output from all 47 species | |
| Ore_g42310 | ACOS5 | acyl-CoA synthetase *(ACS5) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Pir_g08794 | 4CL1, AT4CL1, 4CL.1 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g11346 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c8_730V3.1 | ACOS5, Pp3c8_730 | acyl-CoA synthetase 5 | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g08302 | ACOS5 | acyl-CoA synthetase *(ACS5) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Ppi_g42937 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006230 | 4CL3 | not classified & original description: CDS=1-975 | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0149.g023264 | 4CL1, AT4CL1, 4CL.1 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g51306 | No alias | acyl-CoA synthetase *(ACS5) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Smo173133 | 4CL3 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | OrthoFinder output from all 47 species | |
| Smo177393 | AT4CL2, 4CL2 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc02g088710.3.1 | ACOS5, Solyc02g088710 | acyl-CoA synthetase (ACS5) | 0.08 | OrthoFinder output from all 47 species | |
| Solyc03g097030.3.1 | 4CL3, Solyc03g097030 | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.1 | OrthoFinder output from all 47 species | |
| Solyc03g117870.3.1 | AT4CL2, 4CL2,... | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g068650.4.1 | AT4CL2, 4CL2,... | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g07084 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g09896 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g47039 | ACOS5 | acyl-CoA synthetase *(ACS5) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g11239 | ACOS5 | acyl-CoA synthetase *(ACS5) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g13836 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e004061_P001 | 4CL1, AT4CL1,... | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e008138_P001 | ACOS5, Zm00001e008138 | acyl-CoA synthetase (ACS5) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e013798_P002 | 4CL1, AT4CL1,... | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e016374_P001 | ACOS5, Zm00001e016374 | acyl-CoA synthetase (ACS5) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e022313_P002 | 4CL1, AT4CL1,... | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023286_P002 | 4CL3, Zm00001e023286 | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e037698_P001 | 4CL1, AT4CL1,... | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| MF | GO:0008171 | O-methyltransferase activity | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0016209 | antioxidant activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
| BP | GO:0042545 | cell wall modification | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| No external refs found! |