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  5. Tin_g06794

Tin_g06794 (LSH4)


Aliases : LSH4

Description : plant-specific ALOG-type transcription factor & original description: none


Gene families : OG0001118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001118_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g06794

Target Alias Description ECC score Gene Family Method Actions
AT1G78815 LSH7 Protein of unknown function (DUF640) 0.03 OrthoFinder output from all 47 species
AT2G42610 LSH10 Protein of unknown function (DUF640) 0.03 OrthoFinder output from all 47 species
AT3G04510 LSH2 Protein of unknown function (DUF640) 0.02 OrthoFinder output from all 47 species
AT3G23290 LSH4 No description available 0.03 OrthoFinder output from all 47 species
Als_g17249 LSH4 plant-specific ALOG-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene29667.t1 LSH4, Aspi01Gene29667 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.18G075200.1 LSH4, Ceric.18G075200 plant-specific ALOG-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g44523 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Mp2g00330.1 LSH4 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.01 OrthoFinder output from all 47 species
Nbi_g02008 LSH4 plant-specific ALOG-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Nbi_g04394 LSH6 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g20213 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc05g055020.4.1 LSH1, Solyc05g055020 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1... 0.02 OrthoFinder output from all 47 species
Zm00001e027222_P001 LSH6, Zm00001e027222 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006936 ALOG_dom 50 169
No external refs found!