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  5. Tin_g06649

Tin_g06649


Description : regulatory protein *(CBP60) of systemic acquired resistance & original description: none


Gene families : OG0000494 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000494_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g06649
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT2G18750 No alias Calmodulin-binding protein 0.02 OrthoFinder output from all 47 species
Adi_g107973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04084 No alias regulatory protein *(CBP60) of systemic acquired... 0.02 OrthoFinder output from all 47 species
Aop_g12597 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Cba_g07173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os11g44310.1 LOC_Os11g44310 Calmodulin-binding protein 60 A OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g06787 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
MA_10168387g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10429152g0010 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10435324g0010 No alias Calmodulin-binding protein 60 C OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g13790 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Nbi_g01405 No alias regulatory protein *(CBP60) of systemic acquired... 0.05 OrthoFinder output from all 47 species
Pir_g15480 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR046829 Calmod_bind_C 335 397
IPR046831 Calmodulin_bind_N 106 252
IPR046830 Calmod_bind_M 265 330
No external refs found!