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  5. Tin_g06572

Tin_g06572


Description : not classified & original description: none


Gene families : OG0000207 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000207_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g06572

Target Alias Description ECC score Gene Family Method Actions
Aop_g17570 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000184 No alias not classified & original description: CDS=849-4565 0.04 OrthoFinder output from all 47 species
Dcu_g03194 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16768 No alias recruiting factor *(VETH) of Exocyst complex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01008864001 No alias Vesicle trafficking.target membrane tethering.VETH... 0.04 OrthoFinder output from all 47 species
GSVIVT01008865001 No alias Filament-like plant protein (Fragment) OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
Lfl_g17639 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40486 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03259 No alias microtubule assembly factor *(TCS1) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17862 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29442 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR008587 FPP_plant 2 156
No external refs found!