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  5. Tin_g06474

Tin_g06474 (RHB1A)


Aliases : RHB1A

Description : E3 ubiquiTin ligase *(AIRP1) & original description: none


Gene families : OG0000892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g06474

Target Alias Description ECC score Gene Family Method Actions
AT1G20990 No alias Cysteine/Histidine-rich C1 domain family protein 0.01 OrthoFinder output from all 47 species
Adi_g010577 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14055.t1 Aspi01Gene14055 E3 ubiquitin ligase *(AIRP1) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0052.g031565 No alias not classified & original description: CDS=390-1478 0.04 OrthoFinder output from all 47 species
Dac_g16536 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g10689 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g17979 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g00878 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02066 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g32226 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR004146 DC1 108 152
IPR004146 DC1 3 46
IPR004146 DC1 162 208
IPR004146 DC1 55 99
IPR001841 Znf_RING 288 331
No external refs found!