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  5. Tin_g06402

Tin_g06402 (PBG1)


Aliases : PBG1

Description : beta-type-7 component *(PBG) of 26S proteasome & original description: none


Gene families : OG0004102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004102_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g06402
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00154550 PBG1,... Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder output from all 47 species
AT1G56450 PBG1 20S proteasome beta subunit G1 0.08 OrthoFinder output from all 47 species
Adi_g007501 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Ala_g00951 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Als_g30801 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Aob_g00901 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Aop_g04985 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.07 OrthoFinder output from all 47 species
Azfi_s0350.g066539 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.08 OrthoFinder output from all 47 species
Ceric.08G036200.1 PBG1, Ceric.08G036200 beta-type-7 component *(PBG) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000808.43 PBG1 Protein degradation.26S proteasome.20S core... 0.07 OrthoFinder output from all 47 species
Cre06.g280850 PBG1 Protein degradation.26S proteasome.20S core... 0.13 OrthoFinder output from all 47 species
Dac_g00589 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.07 OrthoFinder output from all 47 species
Dcu_g02600 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Dde_g21621 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Ehy_g26230 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
GSVIVT01025150001 PBG1 Protein degradation.26S proteasome.20S core... 0.1 OrthoFinder output from all 47 species
Gb_09437 PBG1 component beta type-7 of 26S proteasome 0.07 OrthoFinder output from all 47 species
LOC_Os09g33986.1 PBG1, LOC_Os09g33986 component beta type-7 of 26S proteasome 0.04 OrthoFinder output from all 47 species
MA_10427481g0010 PBG1 component beta type-7 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Mp6g01810.1 PBG1 component beta type-7 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Nbi_g04663 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.09 OrthoFinder output from all 47 species
Ore_g20507 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Pir_g00404 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Solyc11g069150.3.1 PBG1, Solyc11g069150 component beta type-7 of 26S proteasome 0.1 OrthoFinder output from all 47 species
Spa_g08872 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Spa_g16372 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.1 OrthoFinder output from all 47 species
Spa_g29943 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.09 OrthoFinder output from all 47 species
Zm00001e010160_P002 PBG1, Zm00001e010160 component beta type-7 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Zm00001e034696_P001 PBG1, Zm00001e034696 component beta type-7 of 26S proteasome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 45 226
No external refs found!