Tin_g06389


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g06389

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00098p00155650 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g39350... 0.03 OrthoFinder output from all 47 species
Adi_g068895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g27991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g46569 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12481 OTP82 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g17033 EMB2261 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g23789 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24718 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33512 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g35854 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g36192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22581 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g27283 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27561 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38090 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g05272 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g19997 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.02G019000.1 Ceric.02G019000 not classified & original description: pacid=50585115... 0.07 OrthoFinder output from all 47 species
Ceric.15G008800.1 Ceric.15G008800 not classified & original description: pacid=50639552... 0.06 OrthoFinder output from all 47 species
Ceric.26G011100.1 Ceric.26G011100 not classified & original description: pacid=50599840... 0.04 OrthoFinder output from all 47 species
Ceric.28G001700.1 Ceric.28G001700 not classified & original description: pacid=50570577... 0.08 OrthoFinder output from all 47 species
Ceric.28G015300.1 Ceric.28G015300 not classified & original description: pacid=50570535... 0.06 OrthoFinder output from all 47 species
Ceric.34G057600.1 Ceric.34G057600 not classified & original description: pacid=50623573... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000851.30 No alias Pentatricopeptide repeat-containing protein At5g61990,... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001130.28 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021035.24 No alias Pentatricopeptide repeat-containing protein At1g63080,... 0.01 OrthoFinder output from all 47 species
Dac_g00755 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g05194 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g05543 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g32529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32949 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43213 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g44564 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29335 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003766001 LPA66 Pentatricopeptide repeat-containing protein At1g08070,... 0.04 OrthoFinder output from all 47 species
Len_g03891 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g17726 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g30844 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33974 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g44147 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g50232 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g25127 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41366 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41382 SLO1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g47042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08417 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21358 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g22892 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27707 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g43377 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g02088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03029 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g17858 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g25436 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g26038 EMB2261 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g19172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63456 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04545 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23595 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30107 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g30780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c6_28980V3.1 Pp3c6_28980 organellar single-stranded DNA binding protein 3 0.01 OrthoFinder output from all 47 species
Ppi_g04637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g23589 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16549 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g28859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo103247 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Spa_g17205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g41440 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 76 121
No external refs found!