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  5. Tin_g06343

Tin_g06343 (HTB4)


Aliases : HTB4

Description : histone *(H2B) & original description: none


Gene families : OG0000176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g06343

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00088340 HTB4,... Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
AT3G45980 HTB9, H2B Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G46030 HTB11 Histone superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G59910 HTB4 Histone superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g086613 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G007900.1 HTB4, Ceric.03G007900 histone *(H2B) & original description: pacid=50571513... 0.03 OrthoFinder output from all 47 species
Ceric.18G011100.1 HTB4, Ceric.18G011100 histone *(H2B) & original description: pacid=50622059... 0.01 OrthoFinder output from all 47 species
Ceric.20G039500.1 HTB4, Ceric.20G039500 histone *(H2B) & original description: pacid=50566293... 0.01 OrthoFinder output from all 47 species
Ceric.24G053100.1 HTB4, Ceric.24G053100 histone *(H2B) & original description: pacid=50628870... 0.02 OrthoFinder output from all 47 species
Cre06.g264900 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g271376 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274250 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g275800 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g276550 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre12.g504700 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre12.g506200 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre13.g570050 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre17.g709150 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre17.g710450 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre17.g711750 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre17.g713450 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre17.g714050 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Dde_g46434 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23594 HTB11 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016164001 No alias Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Gb_32754 HTB11 histone (H2B) 0.02 OrthoFinder output from all 47 species
LOC_Os05g49860.1 HTB11, LOC_Os05g49860 histone (H2B) 0.01 OrthoFinder output from all 47 species
Len_g04914 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
MA_454575g0010 HTB4 histone (H2B) 0.03 OrthoFinder output from all 47 species
MA_6078786g0010 HTB11 histone (H2B) 0.03 OrthoFinder output from all 47 species
Pp3c14_21050V3.1 HTB4, Pp3c14_21050 Histone superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c6_27740V3.1 HTB4, Pp3c6_27740 Histone superfamily protein 0.01 OrthoFinder output from all 47 species
Sam_g37866 No alias histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc06g075800.1.1 HTB11, Solyc06g075800 histone (H2B) 0.02 OrthoFinder output from all 47 species
Solyc12g013510.1.1 HTB11, Solyc12g013510 histone (H2B) 0.02 OrthoFinder output from all 47 species
Spa_g32990 HTB4 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45813 HTB4 histone *(H2B) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g46015 HTB4 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52508 No alias histone *(H2B) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g05754 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09273 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004028_P001 HTB11, Zm00001e004028 histone (H2B) 0.02 OrthoFinder output from all 47 species
Zm00001e009857_P001 HTB11, Zm00001e009857 histone (H2B) 0.04 OrthoFinder output from all 47 species
Zm00001e019346_P001 HTB4, Zm00001e019346 histone (H2B) 0.03 OrthoFinder output from all 47 species
Zm00001e023342_P001 HTB4, Zm00001e023342 histone (H2B) 0.03 OrthoFinder output from all 47 species
Zm00001e034226_P001 HTB11, Zm00001e034226 histone (H2B) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 7 124
No external refs found!