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  5. Tin_g06080

Tin_g06080 (DRB3)


Aliases : DRB3

Description : regulatory protein *(DRB2) of miRNA biogenesis pathway & original description: none


Gene families : OG0000404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g06080
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Ala_g14617 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene19024.t1 DRB2, Aspi01Gene19024 regulatory protein *(DRB2) of miRNA bioGenesis pathway &... 0.03 OrthoFinder output from all 47 species
Azfi_s0132.g049221 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Ceric.11G049600.1 DRB3, Ceric.11G049600 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Dde_g50094 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Msp_g32265 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Pir_g65907 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Solyc11g069460.2.1 DRB2, Solyc11g069460 Double-stranded RNA-binding protein 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g51681 DRB5 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Spa_g54455 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.06 OrthoFinder output from all 47 species
Zm00001e010132_P001 DRB3, Zm00001e010132 Double-stranded RNA-binding protein 5 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR014720 dsRBD_dom 2 65
IPR014720 dsRBD_dom 89 153
No external refs found!