Tin_g05998 (REME1)


Aliases : REME1

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g05998
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Ala_g09082 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11472 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g19167 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22420 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g24705 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26255 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g37463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30812 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g27295 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g27592 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02900 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g03329 MEF22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04129 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05733 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12052 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g13659 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16491 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16522 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16802 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16817 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17445 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g20156 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g21140 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23475 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23798 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g25531 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26531 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g28719 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31401 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31824 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33593 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g37609 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g39235 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67496 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67754 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67766 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67864 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67876 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68130 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68696 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g69416 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene14400.t1 CRR2, Aspi01Gene14400 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34799.t1 Aspi01Gene34799 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52005.t1 Aspi01Gene52005 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70449.t1 Aspi01Gene70449 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0015.g013865 No alias not classified & original description: CDS=1-1626 0.03 OrthoFinder output from all 47 species
Azfi_s0188.g056770 OTP84 not classified & original description: CDS=1-2469 0.04 OrthoFinder output from all 47 species
Ceric.02G019900.1 Ceric.02G019900 not classified & original description: pacid=50585305... 0.05 OrthoFinder output from all 47 species
Ceric.02G071100.1 Ceric.02G071100 not classified & original description: pacid=50585515... 0.05 OrthoFinder output from all 47 species
Ceric.06G036400.1 Ceric.06G036400 not classified & original description: pacid=50619976... 0.03 OrthoFinder output from all 47 species
Ceric.07G041800.1 Ceric.07G041800 not classified & original description: pacid=50626255... 0.04 OrthoFinder output from all 47 species
Ceric.09G024000.1 EMB2261, Ceric.09G024000 not classified & original description: pacid=50587738... 0.11 OrthoFinder output from all 47 species
Ceric.09G087400.1 Ceric.09G087400 not classified & original description: pacid=50586781... 0.03 OrthoFinder output from all 47 species
Ceric.10G028900.1 Ceric.10G028900 not classified & original description: pacid=50613320... 0.03 OrthoFinder output from all 47 species
Ceric.11G040900.1 Ceric.11G040900 not classified & original description: pacid=50596742... 0.04 OrthoFinder output from all 47 species
Ceric.12G018600.1 Ceric.12G018600 not classified & original description: pacid=50602205... 0.06 OrthoFinder output from all 47 species
Ceric.13G031800.1 Ceric.13G031800 not classified & original description: pacid=50636627... 0.04 OrthoFinder output from all 47 species
Ceric.14G027100.1 Ceric.14G027100 not classified & original description: pacid=50633502... 0.03 OrthoFinder output from all 47 species
Ceric.14G073700.1 Ceric.14G073700 not classified & original description: pacid=50633781... 0.04 OrthoFinder output from all 47 species
Ceric.18G013300.1 EMB2758, Ceric.18G013300 not classified & original description: pacid=50620993... 0.03 OrthoFinder output from all 47 species
Ceric.18G079500.1 Ceric.18G079500 not classified & original description: pacid=50621579... 0.03 OrthoFinder output from all 47 species
Ceric.1Z148400.1 Ceric.1Z148400 not classified & original description: pacid=50637111... 0.04 OrthoFinder output from all 47 species
Ceric.22G014800.1 Ceric.22G014800 not classified & original description: pacid=50613770... 0.04 OrthoFinder output from all 47 species
Ceric.23G083100.1 Ceric.23G083100 ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.24G044900.1 CRR2, Ceric.24G044900 not classified & original description: pacid=50629668... 0.06 OrthoFinder output from all 47 species
Ceric.25G017100.1 OTP86, Ceric.25G017100 not classified & original description: pacid=50593496... 0.04 OrthoFinder output from all 47 species
Ceric.26G013500.1 Ceric.26G013500 not classified & original description: pacid=50600195... 0.03 OrthoFinder output from all 47 species
Ceric.26G056100.1 Ceric.26G056100 not classified & original description: pacid=50599681... 0.04 OrthoFinder output from all 47 species
Ceric.26G057900.1 CRR22, Ceric.26G057900 not classified & original description: pacid=50598962... 0.03 OrthoFinder output from all 47 species
Ceric.29G051600.1 Ceric.29G051600 not classified & original description: pacid=50625199... 0.03 OrthoFinder output from all 47 species
Ceric.29G055100.1 Ceric.29G055100 not classified & original description: pacid=50625141... 0.03 OrthoFinder output from all 47 species
Ceric.31G048400.1 Ceric.31G048400 not classified & original description: pacid=50573957... 0.04 OrthoFinder output from all 47 species
Ceric.33G002700.1 Ceric.33G002700 not classified & original description: pacid=50606600... 0.06 OrthoFinder output from all 47 species
Ceric.36G053200.1 CRR22, Ceric.36G053200 not classified & original description: pacid=50568627... 0.04 OrthoFinder output from all 47 species
Dac_g30281 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017989001 LOI1, MEF11 RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
Gb_33439 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.09 OrthoFinder output from all 47 species
LOC_Os06g20870.1 LOC_Os06g20870 Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
LOC_Os06g39650.1 LOC_Os06g39650 Pentatricopeptide repeat-containing protein At1g31430... 0.02 OrthoFinder output from all 47 species
Lfl_g05976 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g03953 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g05482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05790 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g06747 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23638 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g30055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02370 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g06449 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19959 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g30175 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34877 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g35307 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g19972 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g46859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63739 DOT4 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g30693 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g33756 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18881 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31446 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g40980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo105197 CRR22 Pentatricopeptide repeat-containing protein At3g49710... 0.03 OrthoFinder output from all 47 species
Smo41818 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.04 OrthoFinder output from all 47 species
Solyc01g095160.3.1 Solyc01g095160 Pentatricopeptide repeat-containing protein At4g37170... 0.03 OrthoFinder output from all 47 species
Solyc03g114010.3.1 Solyc03g114010 Pentatricopeptide repeat-containing protein At2g29760,... 0.09 OrthoFinder output from all 47 species
Solyc06g048900.1.1 Solyc06g048900 Pentatricopeptide repeat-containing protein At2g40720... 0.04 OrthoFinder output from all 47 species
Solyc07g009220.2.1 Solyc07g009220 Pentatricopeptide repeat-containing protein At2g34400... 0.07 OrthoFinder output from all 47 species
Spa_g14323 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g18381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23540 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55537 DOT4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09800 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 225 272
IPR002885 Pentatricopeptide_repeat 21 69
IPR002885 Pentatricopeptide_repeat 123 171
IPR002885 Pentatricopeptide_repeat 300 328
IPR046848 E_motif 345 400
No external refs found!