Tin_g05949


Description : not classified & original description: none


Gene families : OG0000394 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000394_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g05949

Target Alias Description ECC score Gene Family Method Actions
Adi_g079468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088776 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g109802 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g115133 No alias component *(FLX) of FRI-C transcription effector complex... 0.04 OrthoFinder output from all 47 species
Aop_g05107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11013 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g16074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G054300.1 Ceric.15G054300 not classified & original description: pacid=50639834... 0.05 OrthoFinder output from all 47 species
Ceric.33G055600.1 Ceric.33G055600 not classified & original description: pacid=50607603... 0.03 OrthoFinder output from all 47 species
Dac_g09930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011898001 No alias Protein FLX-like 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Lfl_g06587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29327 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g33152 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00322 No alias component *(FLX) of FRI-C transcription effector complex... 0.03 OrthoFinder output from all 47 species
Pir_g02228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02515 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02944 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g22061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011503 No alias not classified & original description: CDS=195-1040 0.02 OrthoFinder output from all 47 species
Spa_g16924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g42471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02425 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e035071_P001 Zm00001e035071 Protein FLX-like 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
BP GO:0030490 maturation of SSU-rRNA IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!