Tin_g05931


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g05931

Target Alias Description ECC score Gene Family Method Actions
AT1G50270 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g002608 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004353 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021050 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g025728 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036834 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g039747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g043352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069101 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g079527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g095207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g095447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g097074 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g097113 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g098232 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15170 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21644 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g30904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06720 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08755 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16834 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23668 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25552 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03152.t1 Aspi01Gene03152 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene08612.t1 Aspi01Gene08612 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16353.t1 Aspi01Gene16353 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene22090.t1 Aspi01Gene22090 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene31476.t1 Aspi01Gene31476 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51368.t2 CRR22, Aspi01Gene51368 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010913 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-1608 0.05 OrthoFinder output from all 47 species
Azfi_s0007.g011042 No alias not classified & original description: CDS=1-2970 0.04 OrthoFinder output from all 47 species
Azfi_s0098.g043939 EMB2758 not classified & original description: CDS=1-1746 0.05 OrthoFinder output from all 47 species
Azfi_s0104.g044768 EMB2758 not classified & original description: CDS=1-1815 0.03 OrthoFinder output from all 47 species
Azfi_s0108.g045187 No alias not classified & original description: CDS=1-2178 0.04 OrthoFinder output from all 47 species
Azfi_s0235.g059459 OTP86 not classified & original description: CDS=1-2445 0.05 OrthoFinder output from all 47 species
Azfi_s0474.g072983 No alias not classified & original description: CDS=1-2562 0.04 OrthoFinder output from all 47 species
Azfi_s0908.g092257 No alias not classified & original description: CDS=1-1875 0.04 OrthoFinder output from all 47 species
Cba_g06588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07325 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10344 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g18809 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20185 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g34641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34742 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35191 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67769 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g67910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G041400.1 Ceric.01G041400 not classified & original description: pacid=50592429... 0.04 OrthoFinder output from all 47 species
Ceric.03G039400.1 Ceric.03G039400 not classified & original description: pacid=50571919... 0.03 OrthoFinder output from all 47 species
Ceric.18G049300.1 Ceric.18G049300 ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.20G040800.1 OTP86, Ceric.20G040800 not classified & original description: pacid=50566943... 0.03 OrthoFinder output from all 47 species
Ceric.29G060200.1 Ceric.29G060200 not classified & original description: pacid=50624987... 0.04 OrthoFinder output from all 47 species
Ceric.34G063100.1 Ceric.34G063100 not classified & original description: pacid=50623551... 0.04 OrthoFinder output from all 47 species
Ceric.38G052600.1 Ceric.38G052600 not classified & original description: pacid=50580600... 0.05 OrthoFinder output from all 47 species
Dac_g03990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05682 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g07790 MEF22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g22254 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g31882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33215 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08608 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g38682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17418 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g22008 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50257 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07052 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09988 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g11470.1 LOC_Os01g11470 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g02877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03785 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g03880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03913 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17343 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18561 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18982 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22113 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22969 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g23208 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g25719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33772 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g34151 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g49951 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04178 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27766 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g35606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37283 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g02083 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03801 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g06349 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g11000 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g11199 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14901 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28728 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34152 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34405 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g43998 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45781 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46028 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10308 EMB2261 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g27846 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g40774 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02847 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g03417 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g08446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13001 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13434 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60422 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63808 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g64428 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g64477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g66385 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05345 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06851 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08832 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g14465 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g21500 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g22095 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29438 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35988 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43481 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53018 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57817 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62867 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0200.g025598 No alias not classified & original description: CDS=1-3840 0.03 OrthoFinder output from all 47 species
Sam_g16355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25325 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g34646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g43933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04440 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g06871 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g08565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18079 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g18188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18959 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30407 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g33276 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56707 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07718 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11396 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19174 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g20089 No alias ssDNA-binding protein *(OSB) & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g21831 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27339 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g30396 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g34477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e029819_P003 CRR22, Zm00001e029819 RNA editing factor (CRR22) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 169 216
IPR002885 Pentatricopeptide_repeat 67 115
IPR002885 Pentatricopeptide_repeat 271 318
IPR002885 Pentatricopeptide_repeat 3 33
IPR002885 Pentatricopeptide_repeat 348 371
No external refs found!