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  5. Tin_g05833

Tin_g05833 (RABA4D, ATRABA4D)


Aliases : RABA4D, ATRABA4D

Description : A-class RAB GTPase & original description: none


Gene families : OG0001718 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001718_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g05833
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT5G47960 ATRABA4C, RABA4C, SMG1 RAB GTPase homolog A4C 0.03 OrthoFinder output from all 47 species
Als_g08712 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09530 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0155.g053662 ATRABA4C, RABA4C, SMG1 A-class RAB GTPase & original description: CDS=399-1052 0.04 OrthoFinder output from all 47 species
Len_g12448 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
MA_59492g0010 RABA4D, ATRABA4D A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Mp3g12050.1 ATRABA4C, RABA4C, SMG1 A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000578 ATRABA4C, RABA4C, SMG1 A-class RAB GTPase & original description: CDS=1-666 0.03 OrthoFinder output from all 47 species
Zm00001e012878_P002 AtRABA4a,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 13 173
No external refs found!