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  5. Tin_g05643

Tin_g05643


Description : not classified & original description: none


Gene families : OG0000627 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000627_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g05643

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0076.g037780 No alias not classified & original description: CDS=1-1272 0.03 OrthoFinder output from all 47 species
Ceric.33G066600.1 Ceric.33G066600 not classified & original description: pacid=50607344... 0.03 OrthoFinder output from all 47 species
Ehy_g17697 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g24294 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01030048001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
GSVIVT01037782001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
LOC_Os08g03310.1 LOC_Os08g03310 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Len_g11905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40605 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10426583g0010 No alias C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007845 No alias not classified & original description: CDS=1-2574 0.02 OrthoFinder output from all 47 species
Zm00001e020869_P004 Zm00001e020869 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 645 683
IPR025605 OST-HTH/LOTUS_dom 259 336
IPR000571 Znf_CCCH 207 226
IPR000504 RRM_dom 376 423
No external refs found!