1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g05537

Tin_g05537 (U2AF35B, ATU2AF35B)


Aliases : U2AF35B, ATU2AF35B

Description : small subunit of U2AF pre-RNA splicing auxiliary factor complex & original description: none


Gene families : OG0001523 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001523_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g05537

Target Alias Description ECC score Gene Family Method Actions
Adi_g054852 U2AF35B, ATU2AF35B small subunit of U2AF pre-RNA splicing auxiliary factor... 0.04 OrthoFinder output from all 47 species
Adi_g059464 U2AF35B, ATU2AF35B small subunit of U2AF pre-RNA splicing auxiliary factor... 0.02 OrthoFinder output from all 47 species
Aspi01Gene58236.t1 ATU2AF35A,... small subunit of U2AF pre-RNA splicing auxiliary factor... 0.05 OrthoFinder output from all 47 species
Azfi_s0032.g024571 U2AF35B, ATU2AF35B small subunit of U2AF pre-RNA splicing auxiliary factor... 0.04 OrthoFinder output from all 47 species
Cba_g32835 U2AF35B, ATU2AF35B small subunit of U2AF pre-RNA splicing auxiliary factor... 0.04 OrthoFinder output from all 47 species
Ceric.39G048700.1 ATU2AF35A,... small subunit of U2AF pre-RNA splicing auxiliary factor... 0.03 OrthoFinder output from all 47 species
Dde_g04258 U2AF35B, ATU2AF35B small subunit of U2AF pre-RNA splicing auxiliary factor... 0.03 OrthoFinder output from all 47 species
LOC_Os05g48960.4 U2AF35B,... small subunit of U2AF pre-RNA splicing auxiliary factor complex 0.03 OrthoFinder output from all 47 species
Solyc10g083640.2.1 U2AF35B,... small subunit of U2AF pre-RNA splicing auxiliary factor complex 0.03 OrthoFinder output from all 47 species
Zm00001e011429_P001 U2AF35B,... small subunit of U2AF pre-RNA splicing auxiliary factor complex 0.03 OrthoFinder output from all 47 species
Zm00001e032430_P001 U2AF35B,... small subunit of U2AF pre-RNA splicing auxiliary factor complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 83 139
IPR000571 Znf_CCCH 150 173
IPR000571 Znf_CCCH 14 38
No external refs found!