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  5. Tin_g05525

Tin_g05525 (GAE1)


Aliases : GAE1

Description : UDP-D-glucuronic acid 4-epimerase & original description: none


Gene families : OG0000504 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000504_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g05525

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00257170 GAE6,... Carbohydrate metabolism.nucleotide sugar... 0.04 OrthoFinder output from all 47 species
AMTR_s00019p00132110 GAE1,... Carbohydrate metabolism.nucleotide sugar... 0.03 OrthoFinder output from all 47 species
Aev_g12135 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17233 GAE2 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05460 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47972 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19266.t1 GAE1, Aspi01Gene19266 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0157.g053795 GAE1 UDP-D-glucuronic acid 4-epimerase & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0364.g066943 GAE2 UDP-D-glucuronic acid 4-epimerase & original... 0.03 OrthoFinder output from all 47 species
Cba_g21857 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G086400.1 GAE1, Ceric.04G086400 UDP-D-glucuronic acid 4-epimerase & original... 0.03 OrthoFinder output from all 47 species
Ceric.25G058200.1 GAE1, Ceric.25G058200 UDP-D-glucuronic acid 4-epimerase & original... 0.04 OrthoFinder output from all 47 species
Dac_g08608 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g13114 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g41440.1 GAE6, LOC_Os08g41440 UDP-D-glucuronic acid 4-epimerase 0.03 OrthoFinder output from all 47 species
Mp2g22600.1 GAE1 UDP-D-glucuronic acid 4-epimerase 0.02 OrthoFinder output from all 47 species
Mp7g17210.1 GAE1 UDP-D-glucuronic acid 4-epimerase 0.03 OrthoFinder output from all 47 species
Spa_g14885 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016096_P001 GAE1, Zm00001e016096 UDP-D-glucuronic acid 4-epimerase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 96 415
No external refs found!