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  5. Tin_g05381

Tin_g05381


Description : RING-H2-class ATL-subclass E3 ubiquiTin ligase & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g05381

Target Alias Description ECC score Gene Family Method Actions
AT2G44578 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G46160 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g051114 No alias E3 ubiquitin ligase *(BRH) & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g051621 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g02140 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.07 OrthoFinder output from all 47 species
Aop_g07686 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene37200.t1 Aspi01Gene37200 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene70368.t1 ATL8, Aspi01Gene70368 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15357 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
LOC_Os03g44636.1 LOC_Os03g44636 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g01961 RHA3B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57166 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g64245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04891 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g55903 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Tin_g09893 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 97 141
No external refs found!