Description : component *(uL22) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0001495 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001495_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00013p00211990 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00013p00223470 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00013p00224030 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00013p00225150 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
AT1G27400 | No alias | Ribosomal protein L22p/L17e family protein | 0.02 | OrthoFinder output from all 47 species | |
Aop_g07938 | No alias | component *(uL22) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene42009.t1 | Aspi01Gene42009 | component *(uL22) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g10623 | No alias | component *(uL22) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g16328 | No alias | component *(uL22) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g41810.1 | LOC_Os08g41810 | component RPL17 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
MA_10430182g0010 | No alias | component RPL17 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
MA_64923g0010 | No alias | component RPL17 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Pir_g58342 | No alias | component *(uL22) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g071880.4.1 | Solyc06g071880 | component RPL17 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Spa_g11851 | No alias | component *(uL22) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e003661_P001 | Zm00001e003661 | component RPL17 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e021953_P003 | Zm00001e021953 | component RPL17 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e031261_P001 | Zm00001e031261 | component RPL17 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005509 | calcium ion binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
MF | GO:0008017 | microtubule binding | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0031267 | small GTPase binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0042393 | histone binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
MF | GO:0051011 | microtubule minus-end binding | IEP | HCCA |
MF | GO:0051020 | GTPase binding | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001063 | Ribosomal_L22 | 17 | 152 |
No external refs found! |