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  5. Tin_g05247

Tin_g05247


Description : not classified & original description: none


Gene families : OG0005770 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005770_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g05247

Target Alias Description ECC score Gene Family Method Actions
AT3G11960 No alias Cleavage and polyadenylation specificity factor (CPSF) A... 0.04 OrthoFinder output from all 47 species
Aev_g13991 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11696.t1 Aspi01Gene11696 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.37G065800.1 Ceric.37G065800 not classified & original description: pacid=50615955... 0.05 OrthoFinder output from all 47 species
Dcu_g10841 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os07g10390.1 LOC_Os07g10390 DNA damage-binding protein 1a OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g02452 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10432916g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_129261g0030 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_20031g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ppi_g62455 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54612 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0050290 sphingomyelin phosphodiesterase D activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR018846 Cleavage/polyA-sp_fac_asu_N 100 670
IPR004871 Cleavage/polyA-sp_fac_asu_C 969 1328
No external refs found!