Tin_g05227


Description : component *(ACINUS) of RNA quality control Exon Junction complex & original description: none


Gene families : OG0001433 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001433_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g05227

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00217580 evm_27.TU.AmTr_v1... RNA processing.RNA quality control Exon Junction complex... 0.02 OrthoFinder output from all 47 species
AMTR_s00101p00067890 evm_27.TU.AmTr_v1... RNA processing.RNA quality control Exon Junction complex... 0.04 OrthoFinder output from all 47 species
Als_g12459 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Als_g27768 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.07 OrthoFinder output from all 47 species
Als_g39202 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07390 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Aop_g14212 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Aop_g68608 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Aspi01Gene37617.t1 Aspi01Gene37617 component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Azfi_s0007.g010562 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Cba_g39107 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Ceric.13G077200.1 Ceric.13G077200 component *(ACINUS) of RNA quality control Exon Junction... 0.05 OrthoFinder output from all 47 species
Dac_g10594 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Dac_g11157 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.06 OrthoFinder output from all 47 species
Dcu_g09840 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.05 OrthoFinder output from all 47 species
Dcu_g39092 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.05 OrthoFinder output from all 47 species
Dde_g23233 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.05 OrthoFinder output from all 47 species
Dde_g25731 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Ehy_g19978 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
GSVIVT01008977001 No alias RNA processing.RNA quality control Exon Junction complex... 0.02 OrthoFinder output from all 47 species
GSVIVT01022190001 No alias RNA processing.RNA quality control Exon Junction complex... 0.03 OrthoFinder output from all 47 species
Len_g24712 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Lfl_g34375 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.05 OrthoFinder output from all 47 species
MA_7197g0010 No alias component ACINUS of RNA quality control Exon Junction complex 0.02 OrthoFinder output from all 47 species
Mp2g15000.1 No alias component ACINUS of RNA quality control Exon Junction complex 0.02 OrthoFinder output from all 47 species
Msp_g25304 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.05 OrthoFinder output from all 47 species
Msp_g44218 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.06 OrthoFinder output from all 47 species
Nbi_g09348 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Ore_g40456 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04495 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Pir_g08467 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Pir_g57721 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Ppi_g08232 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Ppi_g42834 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Sam_g37080 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Solyc04g072670.4.1 Solyc04g072670 component ACINUS of RNA quality control Exon Junction complex 0.03 OrthoFinder output from all 47 species
Spa_g12594 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000009 alpha-1,6-mannosyltransferase activity IEP HCCA
MF GO:0000030 mannosyltransferase activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004376 glycolipid mannosyltransferase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR032552 RSB_motif 870 919
IPR003034 SAP_dom 11 44
No external refs found!