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  5. Tin_g05041

Tin_g05041


Description : not classified & original description: none


Gene families : OG0002972 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002972_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g05041
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT5G11840 No alias Protein of unknown function (DUF1230) 0.03 OrthoFinder output from all 47 species
AT5G67370 No alias Protein of unknown function (DUF1230) 0.06 OrthoFinder output from all 47 species
Adi_g017916 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g10613 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g11244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01604 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g12083 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g23772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02082 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10312 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Cba_g04442 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cre05.g237050 No alias Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27,... 0.01 OrthoFinder output from all 47 species
Dac_g03168 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dac_g12303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01116 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01000154001 No alias Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27,... 0.03 OrthoFinder output from all 47 species
LOC_Os03g32490.1 LOC_Os03g32490 Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27,... 0.02 OrthoFinder output from all 47 species
Len_g00537 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g42992 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g09357 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g11114 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g45130 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g00652 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g46794 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Solyc02g092700.3.1 Solyc02g092700 Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27,... 0.05 OrthoFinder output from all 47 species
Solyc08g065260.4.1 Solyc08g065260 Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27,... 0.03 OrthoFinder output from all 47 species
Spa_g54314 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR009631 CGLD27-like 90 231
No external refs found!