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  5. Tin_g05026

Tin_g05026


Description : not classified & original description: none


Gene families : OG0001287 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001287_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g05026
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Adi_g060358 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g01308 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g01765 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g09321 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g51289 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g21894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02125 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g39197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g69796 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.01G061200.1 Ceric.01G061200 not classified & original description: pacid=50591052... 0.04 OrthoFinder output from all 47 species
Ceric.01G061300.1 Ceric.01G061300 not classified & original description: pacid=50591700... 0.04 OrthoFinder output from all 47 species
Ceric.07G018800.1 Ceric.07G018800 not classified & original description: pacid=50626140... 0.02 OrthoFinder output from all 47 species
Dac_g15149 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g05360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009018001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os04g38310.1 LOC_Os04g38310 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g39714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g47449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g31085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g05870.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g27507 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02771 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10021 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03651 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015278 No alias not classified & original description: CDS=1-1089 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020368 No alias not classified & original description: CDS=155-916 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021901 No alias not classified & original description: CDS=192-1037 0.03 OrthoFinder output from all 47 species
Sam_g26906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06610 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g15922 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g49770 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007936_P001 Zm00001e007936 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e040993_P001 Zm00001e040993 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR025131 DUF4057 3 279
No external refs found!