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  5. Tin_g04871

Tin_g04871 (YKT61, ATGP1, ATYKT61)


Aliases : YKT61, ATGP1, ATYKT61

Description : R-type YKT6-group component of SNARE longin membrane fusion complex & original description: none


Gene families : OG0002670 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002670_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g04871
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Ceric.36G055700.1 YKT61, ATGP1,... R-type YKT6-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Dac_g18011 YKT61, ATGP1, ATYKT61 R-type YKT6-group component of SNARE longin membrane... 0.07 OrthoFinder output from all 47 species
Dde_g23154 YKT61, ATGP1, ATYKT61 R-type YKT6-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR042855 V_SNARE_CC 136 193
IPR010908 Longin_dom 45 112
No external refs found!