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  5. Tin_g04737

Tin_g04737 (PUM7, APUM7)


Aliases : PUM7, APUM7

Description : not classified & original description: none


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g04737

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0040.g026500 APUM12, PUM12 not classified & original description: CDS=1-2874 0.03 OrthoFinder output from all 47 species
Cba_g33255 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g09040.1 APUM12, PUM12 Pumilio homolog 12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g04974 PUM7, APUM7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20896 APUM12, PUM12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e039541_P001 APUM12, PUM12,... Pumilio homolog 12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 831 849
IPR001313 Pumilio_RNA-bd_rpt 759 787
IPR001313 Pumilio_RNA-bd_rpt 574 608
IPR001313 Pumilio_RNA-bd_rpt 721 754
IPR001313 Pumilio_RNA-bd_rpt 686 716
IPR001313 Pumilio_RNA-bd_rpt 651 678
IPR001313 Pumilio_RNA-bd_rpt 610 640
IPR001313 Pumilio_RNA-bd_rpt 794 827
No external refs found!