Tin_g04616

Description : subunit beta of ATP synthase peripheral MF1 subcomplex & original description: none

Gene families : OG0000973 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000973_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g04616

Target	Alias	Description	ECC score	Gene Family Method
AT5G08670	No alias	ATP synthase alpha/beta family protein	0.04	OrthoFinder output from all 47 species
AT5G08680	No alias	ATP synthase alpha/beta family protein	0.03	OrthoFinder output from all 47 species
AT5G08690	No alias	ATP synthase alpha/beta family protein	0.06	OrthoFinder output from all 47 species
Als_g41810	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g01310	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.06	OrthoFinder output from all 47 species
Cba_g16727	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.03	OrthoFinder output from all 47 species
Ceric.02G065800.1	Ceric.02G065800	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.03	OrthoFinder output from all 47 species
Ceric.13G079900.1	Ceric.13G079900	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.07	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001376.2	No alias	ATP synthase subunit beta, mitochondrial...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001376.3	No alias	ATP synthase subunit beta, mitochondrial...	0.01	OrthoFinder output from all 47 species
Cre17.g698000	No alias	Cellular respiration.oxidative phosphorylation.ATP...	0.02	OrthoFinder output from all 47 species
Dcu_g20342	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.03	OrthoFinder output from all 47 species
Dcu_g39575	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.04	OrthoFinder output from all 47 species
GSVIVT01008378001	No alias	Cellular respiration.oxidative phosphorylation.ATP...	0.03	OrthoFinder output from all 47 species
GSVIVT01011797001	No alias	Cellular respiration.oxidative phosphorylation.ATP...	0.07	OrthoFinder output from all 47 species
LOC_Os01g49190.1	LOC_Os01g49190	subunit beta of ATP synthase peripheral MF1 subcomplex	0.06	OrthoFinder output from all 47 species
LOC_Os05g47980.1	LOC_Os05g47980	subunit beta of ATP synthase peripheral MF1 subcomplex	0.05	OrthoFinder output from all 47 species
Mp2g15450.1	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex	0.04	OrthoFinder output from all 47 species
Nbi_g06174	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.04	OrthoFinder output from all 47 species
Pir_g12123	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.03	OrthoFinder output from all 47 species
Pir_g15790	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.04	OrthoFinder output from all 47 species
Pir_g32512	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.03	OrthoFinder output from all 47 species
Sam_g17065	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.03	OrthoFinder output from all 47 species
Smo139657	No alias	Cellular respiration.oxidative phosphorylation.ATP...	0.05	OrthoFinder output from all 47 species
Solyc02g091130.3.1	Solyc02g091130	subunit beta of ATP synthase peripheral MF1 subcomplex	0.03	OrthoFinder output from all 47 species
Solyc04g007550.4.1	Solyc04g007550	subunit beta of ATP synthase peripheral MF1 subcomplex	0.04	OrthoFinder output from all 47 species
Solyc05g008460.4.1	Solyc05g008460	subunit beta of ATP synthase peripheral MF1 subcomplex	0.04	OrthoFinder output from all 47 species
Spa_g10765	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.03	OrthoFinder output from all 47 species
Spa_g14674	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.06	OrthoFinder output from all 47 species
Spa_g26323	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.06	OrthoFinder output from all 47 species
Zm00001e032346_P003	Zm00001e032346	subunit beta of ATP synthase peripheral MF1 subcomplex	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0034220	monoatomic ion transmembrane transport	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046034	ATP metabolic process	IEA	Interproscan
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0098655	monoatomic cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1902600	proton transmembrane transport	IEA	Interproscan

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
CC	GO:0000776	kinetochore	IEP	HCCA
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0004590	orotidine-5'-phosphate decarboxylase activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006206	pyrimidine nucleobase metabolic process	IEP	HCCA
BP	GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009112	nucleobase metabolic process	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0019856	pyrimidine nucleobase biosynthetic process	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
CC	GO:0031262	Ndc80 complex	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0046112	nucleobase biosynthetic process	IEP	HCCA
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	HCCA
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000194	ATPase_F1/V1/A1_a/bsu_nucl-bd	211	432
IPR004100	ATPase_F1/V1/A1_a/bsu_N	88	154

External Links

No external refs found!

Tin_g04616

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation