Tin_g04614 (SYP32, ATSYP32)


Aliases : SYP32, ATSYP32

Description : Qa-type SYP3-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0002044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002044_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g04614

Target Alias Description ECC score Gene Family Method Actions
Aev_g04698 SYP32, ATSYP32 Qa-type SYP3-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Ehy_g15873 SYP32, ATSYP32 Qa-type SYP3-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
GSVIVT01035729001 SYP32, ATSYP32 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
Nbi_g03561 SYP32, ATSYP32 Qa-type SYP3-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010835 SYP32, ATSYP32 Qa-type SYP3-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g020020 SYP32, ATSYP32 Qa-type SYP3-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Solyc07g054140.3.1 ATSED5, SED5,... SYP3-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species
Spa_g10120 SYP32, ATSYP32 Qa-type SYP3-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 294 344
IPR021538 Syntaxin-5_N 1 21
No external refs found!