Tin_g04541

Description : not classified & original description: none

Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g04541
Cluster	HCCA: Cluster_159

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0037.g026030	No alias	not classified & original description: CDS=422-1717	0.03	OrthoFinder output from all 47 species
Azfi_s0149.g053226	No alias	not classified & original description: CDS=547-1935	0.04	OrthoFinder output from all 47 species
Cba_g19823	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Len_g19867	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g02719	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g26586	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e012709_P005	Zm00001e012709	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e030652_P001	Zm00001e030652	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006629	lipid metabolic process	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	111	169
IPR000504	RRM_dom	8	65

External Links

No external refs found!