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  5. Tin_g04378

Tin_g04378


Description : not classified & original description: none


Gene families : OG0000509 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g04378
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT4G35655 No alias RPM1-interacting protein 4 (RIN4) family protein 0.01 OrthoFinder output from all 47 species
Als_g35611 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Aob_g11220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0111.g045667 RIN4 not classified & original description: CDS=218-763 0.03 OrthoFinder output from all 47 species
Ceric.02G076700.1 RIN4, Ceric.02G076700 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Ehy_g10233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16670 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.04 OrthoFinder output from all 47 species
LOC_Os02g49340.1 LOC_Os02g49340 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g63140.1 RIN4, LOC_Os03g63140 RIN4 effector-triggered immunity RPM1-interacting factor 0.02 OrthoFinder output from all 47 species
LOC_Os04g52950.1 LOC_Os04g52950 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g15816 NOI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12478 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0083.g018170 RIN4 not classified & original description: CDS=1115-1720 0.03 OrthoFinder output from all 47 species
Sam_g01442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g083390.4.1 RIN4, Solyc06g083390 RIN4 effector-triggered immunity RPM1-interacting factor 0.02 OrthoFinder output from all 47 species
Spa_g14777 NOI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18819 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.01 OrthoFinder output from all 47 species
Tin_g23904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003639_P001 RIN4, Zm00001e003639 RIN4 effector-triggered immunity RPM1-interacting factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR008700 TypeIII_avirulence_cleave 74 109
No external refs found!