Tin_g04183


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g04183

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00109240 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AMTR_s03531p00004900 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g02330,... 0.03 OrthoFinder output from all 47 species
Adi_g003361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005234 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g017810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g043109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g048224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12663 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16615 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17249 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g19430 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g22420 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g23823 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24375 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24626 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24674 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27165 MEF19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27276 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31741 SLO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33293 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36028 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05671 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g08655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16102 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17427 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28532 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68107 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene04772.t1 CRR22, Aspi01Gene04772 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22875.t1 Aspi01Gene22875 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33635.t1 Aspi01Gene33635 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G057100.1 Ceric.32G057100 not classified & original description: pacid=50598475... 0.03 OrthoFinder output from all 47 species
Dac_g09065 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g09646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18416 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19096 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19488 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28766 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30484 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g32259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37184 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g42553 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43221 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45763 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23809 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13146 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19509 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19510 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08590 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14332 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g16238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32582 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63825 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03894 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004758 No alias not classified & original description: CDS=1-2223 0.03 OrthoFinder output from all 47 species
Sam_g29293 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g065410.3.1 CRR22, Solyc02g065410 Pentatricopeptide repeat-containing protein At1g20230... 0.02 OrthoFinder output from all 47 species
Spa_g02585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05656 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10643 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17793 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34821 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35609 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g37419 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g40333 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e008200_P001 Zm00001e008200 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 410 458
IPR002885 Pentatricopeptide_repeat 613 662
IPR002885 Pentatricopeptide_repeat 715 762
IPR002885 Pentatricopeptide_repeat 309 357
IPR002885 Pentatricopeptide_repeat 206 253
IPR002885 Pentatricopeptide_repeat 181 203
IPR002885 Pentatricopeptide_repeat 521 545
IPR002885 Pentatricopeptide_repeat 107 135
IPR002885 Pentatricopeptide_repeat 789 811
IPR002885 Pentatricopeptide_repeat 689 710
No external refs found!