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  5. Tin_g04156

Tin_g04156


Description : hydroxyproline O-galactosyltransferase *(GALT) & original description: none


Gene families : OG0000727 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000727_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g04156
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00239510 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00262720 GALT1,... Protein modification.N-linked glycosylation.complex... 0.03 OrthoFinder output from all 47 species
AT1G74800 No alias Galactosyltransferase family protein 0.02 OrthoFinder output from all 47 species
AT3G06440 No alias Galactosyltransferase family protein 0.04 OrthoFinder output from all 47 species
AT4G21060 No alias Galactosyltransferase family protein 0.03 OrthoFinder output from all 47 species
Aop_g05582 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene36429.t1 Aspi01Gene36429 hydroxyproline O-galactosyltransferase *(GALT) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene64600.t1 Aspi01Gene64600 hydroxyproline O-galactosyltransferase *(GALT) &... 0.05 OrthoFinder output from all 47 species
Cba_g16473 GALT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g34486 GALT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26234 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.03 OrthoFinder output from all 47 species
Ehy_g05968 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.03 OrthoFinder output from all 47 species
Ehy_g07043 GALT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13839 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.03 OrthoFinder output from all 47 species
LOC_Os06g12390.2 GALT1, LOC_Os06g12390 beta-1,3-galactosyltransferase 0.03 OrthoFinder output from all 47 species
LOC_Os08g03670.1 LOC_Os08g03670 hydroxyproline-O-galactosyltransferase (GALT). AGP... 0.02 OrthoFinder output from all 47 species
MA_10435969g0020 GALT1 Beta-1,3-galactosyltransferase GALT1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp8g03480.1 GALT1 Beta-1,3-galactosyltransferase GALT1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Pir_g16236 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.03 OrthoFinder output from all 47 species
Pir_g18677 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.03 OrthoFinder output from all 47 species
Solyc02g070400.3.1 Solyc02g070400 hydroxyproline-O-galactosyltransferase (GALT). AGP... 0.02 OrthoFinder output from all 47 species
Solyc05g006680.4.1 Solyc05g006680 hydroxyproline-O-galactosyltransferase (GALT). AGP... 0.02 OrthoFinder output from all 47 species
Zm00001e021785_P001 Zm00001e021785 hydroxyproline-O-galactosyltransferase (GALT). AGP... 0.04 OrthoFinder output from all 47 species
Zm00001e030866_P001 GALT1, Zm00001e030866 beta-1,3-galactosyltransferase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0005986 sucrose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0050307 sucrose-phosphate phosphatase activity IEP HCCA
MF GO:0050308 sugar-phosphatase activity IEP HCCA
InterPro domains Description Start Stop
IPR002659 Glyco_trans_31 461 644
IPR001079 Galectin_CRD 206 413
No external refs found!