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  5. Tin_g04125

Tin_g04125


Description : RNA polymerase nuclear import factor *(RIMA) & original description: none


Gene families : OG0005503 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005503_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g04125

Target Alias Description ECC score Gene Family Method Actions
Adi_g058433 No alias RNA polymerase nuclear import factor *(RIMA) & original... 0.03 OrthoFinder output from all 47 species
Aev_g01448 No alias RNA polymerase nuclear import factor *(RIMA) & original... 0.02 OrthoFinder output from all 47 species
Pir_g18472 No alias RNA polymerase nuclear import factor *(RIMA) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g44904 No alias RNA polymerase nuclear import factor *(RIMA) & original... 0.03 OrthoFinder output from all 47 species
Spa_g11191 No alias RNA polymerase nuclear import factor *(RIMA) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR007308 Rtr1/RPAP2_dom 37 109
No external refs found!