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  5. Tin_g04030

Tin_g04030


Description : regulatory protein *(LESV) involved in organization of starch granule matrix & original description: none


Gene families : OG0005929 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005929_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g04030
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00269840 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Ehy_g03857 No alias regulatory protein *(LESV) involved in organization of... 0.02 OrthoFinder output from all 47 species
Len_g04315 No alias regulatory protein *(LESV) involved in organization of... 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005292 No alias not classified & original description: CDS=1-1389 0.02 OrthoFinder output from all 47 species
Spa_g12050 No alias regulatory protein *(LESV) involved in organization of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!