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  5. Tin_g03923

Tin_g03923 (SMT1, CPH)


Aliases : SMT1, CPH

Description : EC_2.1 transferase transferring one-carbon group & original description: none


Gene families : OG0000656 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000656_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g03923
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Adi_g116944 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ala_g08847 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Aop_g01656 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.07 OrthoFinder output from all 47 species
Ceric.18G025100.1 SMT1, CPH,... EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Cre12.g500500 SMT3 Lipid metabolism.phytosterols.campesterol... 0.01 OrthoFinder output from all 47 species
Ehy_g19532 SMT2, FRL1, CVP1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ore_g26639 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Pir_g07811 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Smo89663 SMT1, CPH Lipid metabolism.phytosterols.campesterol... 0.02 OrthoFinder output from all 47 species
Solyc01g111830.3.1 SMT2, FRL1,... sterol C-24 methyltransferase 0.04 OrthoFinder output from all 47 species
Spa_g24171 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006694 steroid biosynthetic process IEA Interproscan
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR013216 Methyltransf_11 106 202
IPR013705 Sterol_MeTrfase_C 279 342
No external refs found!