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  5. Tin_g03561

Tin_g03561


Description : not classified & original description: none


Gene families : OG0000978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000978_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g03561

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00089p00160720 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00089p00172750 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G48090 No alias calcium-dependent lipid-binding family protein 0.02 OrthoFinder output from all 47 species
Aop_g06770 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42699.t1 Aspi01Gene42699 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42703.t1 Aspi01Gene42703 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42704.t2 Aspi01Gene42704 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene55584.t1 Aspi01Gene55584 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene55587.t1 Aspi01Gene55587 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55589.t1 Aspi01Gene55589 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene55590.t1 Aspi01Gene55590 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.09G071400.1 Ceric.09G071400 not classified & original description: pacid=50587640... 0.05 OrthoFinder output from all 47 species
Lfl_g03526 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc08g077490.2.1 Solyc08g077490 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR031642 VPS13_mid_RBG 584 822
IPR009291 Vps62 2265 2410
IPR009291 Vps62 2024 2187
IPR010482 Peroxin 2930 3055
IPR009543 VPS13_VAB 3313 3594
IPR009543 VPS13_VAB 3557 3686
IPR031646 VPS13_extend_chorein 141 386
IPR026854 VPS13-like_N 2 115
No external refs found!